Author Archives: bo1rkb

6 yr postdoc in Vienna

6-year PostDoc / University Assistant
Department of Botany and Biodiversity Research, Faculty of Life Sciences, University of Vienna, Austria
A 6-year post-doctoral position is available at Department of Botany & Biodiversity Research, Faculty of Life Sciences, University of Vienna, to work on the ecological & evolutionary genomics of plant adaptation, speciation and species radiation with Christian Lexer and colleagues (https://evolgenomics.univie.ac.at/). We are looking for a person with experience in the use of current DNA / RNA sequencing approaches to address fundamental questions in population genetics, evolutionary biology and / or biogeography in plants. This includes a keen interest in integrative approaches towards understanding the origin, maintenance, and functioning of biological diversity. University of Vienna offers an attractive and dynamic research location in a city with exceptional quality of life and in a country with excellent research infrastructure and funding provision.
Extent of Employment: 40 hours/week. Salary grading in accordance with relevant work experience.
Job Description: Participation in research projects in the group, including co-supervision / mentoring of PhD and MSc students – International publication and presentation activities – Contribution to high-quality external (third-party) research grant applications – Freedom to develop high-quality external (third-party) research grant applications as main applicant – Opportunity to participate in teaching topics of shared interest.
Profile: Doctoral degree in biology or equivalent field / Focus on molecular evolutionary biology or biogeography of plants – Experience in population genetics, evolutionary genomics, and/or evolutionary systems biology, especially the use of current DNA / RNA sequencing approaches and associated analytical tools – Excellent written and oral communication skills in English – Computer literacy, including experience with Unix / Linux based analysis software and R – Ability to work in teams – Experience in teaching. Duration of the contract: 6 years.
To apply: Your application must include the following documents: motivation letter (<1 page)- Scientific CV – List of publications – Brief draft of research interests – Contact details of three references. Please see full job description and submit your application via the website of the Job Center at the University of Vienna (http://jobcenter.univie.ac.at; email: jobcenter@univie.ac.at) no later than 16.06.2019, mentioning job reference no. 9678. For more information please contact: Christian Lexer, christian.lexer@univie.ac.at

Ecological genetics group

Registration is now open but will be closing soon for this year’s annual Ecological Genetics Group meeting, in association with the British Ecological Society and Genetics Society. Getting registering so you don’t miss out!

This year’s conference is to be held on the 16th to the 18th of April at the stunning Downing College, University of Cambridge. There will be a full scientific and social programme throughout the conference to bring together those with an interest in population genetics and ecology and evolution. The programme will include a series of talks and a poster session on relevant topics including talks by our two confirmed guest speaks,

Dr Matt Davey, Department of Plant Sciences, University of Cambridge

https://www.plantsci.cam.ac.uk/directory/davey-matthew

And Prof Bill Amos, Department of Zoology, University of Cambridge

https://www.zoo.cam.ac.uk/directory/william-amos

There will also be the opportunity for a behind the scenes tour of the Sainsbury Laboratory Herbarium at the University. A collection dating back 300 years that will allow you to get up close to specimens collected by the Grandfathers of evolutionary theory, Darwin and Wallace. The Cambridge Genomics Services will a be holding a Genomics and Bioinformatics session to help with all your Next-Gen needs. And our postgrad student workshop this year it will be on ‘How to review a paper.’

Let us not forget the now famous EGG-Heads quiz which will be held after the conference dinner.

Full Conference details can be found here

https://www.britishecologicalsociety.org/event/ecological-genetics-group-63rd-annual-meeting/

Identifying barriers to gene flow in the genome

We are pleased to announce the SMBE Satellite Meeting and Workshop on ‘Identifying barriers to gene flow in the genome’ to be held **17th-19th June 2019** at the Marine Biology Laboratory, Tjärnö, Sweden.

Speciation genomics is a fast moving and rapidly changing field. Genome scans and demographic inference are popular tools for studying how barriers to gene flow evolve and how species diverge, but the field has only recently begun to take into account confounding factors that might bias these methods.

If standard approaches are insufficient for identifying barriers to gene flow and understanding the processes involved in speciation, where do we go next? One way forward is the use of sophisticated approaches to jointly infer signals of selection, gene flow and demographic history. We can also use efficient simulation to introduce greater statistical rigour to our approaches.

This three day workshop/meeting on speciation genomics will combine talks from invited speakers and participants, a discussion panel and a hands-on workshop to learn how to use a composite likelihood approach to infer selection, gene flow and demography from genome scan data.

Invited speakers include:
* Reto Burri (University of Jena)
* Jonna Kulmuni (University of Helsinki)
* Kelley Harris (University of Washington)
* Simon Aeschbacher (University of Zurich)
* Frederic Guillaume (University of Zurich)

The practical workshop will be led by Jerome Kelleher (Big Data Institute, Oxford) (the importance of simulations) and Konrad Lohse (University of Edinburgh). Some basic experience in Unix, and Python programming is necessary but we provide links to resources on our website: https://smbespeciationgenomics.github.io/

There is space for approximately 40-50 participants. To apply, please register at https://smbespeciationgenomics.github.io//register/. The deadline for applications is 25th February 2019.

It is free to register but attendance will cost $300 (US) to cover accommodation and food for the three days. Travel bursaries are available for MSc and PhD students wishing to attend.

We encourage participants from all backgrounds and levels to apply and we look forward to welcoming you to Sweden in June!

https://smbespeciationgenomics.github.io/

Mark Ravinet, Marina Rafajlovi?, Michael Matschiner, Simon Martin, Chris Jiggins & Markus Möst

Postdoc on asexual reproduction in aphids

A 18-month postdoctoral position is available in the team Ecology and
Genetics of Insects (https://www6.rennes.inra.fr/igepp_eng/Researchteams/
Ecology-and-Genetics-of-Insects), at INRA, Rennes, France, starting in
June 2019.

Contact Julie.Jaquiery@inra.fr or Jean-Christophe.Simon@inra.fr before 15 Feb 19

Postdoc and PhD place in Bangor

PDRA: http://labadopulos.co.uk/wp-content/uploads/2018/12/pdra-flyer2.pdf

phd: http://labadopulos.co.uk/wp-content/uploads/2018/12/PHD-flyer.pdf

Postdoc : Marine population genomics

https://academicpositions.com/ad/university-of-gothenburg/2018/postdoc-marine-population-genomics/120708

Research technician

Seven month post available here in Sheffield, working on our rotifer experimental evolution project

The reference number is UOS020788 closing on the 15 November 2018.

https://www.sheffield.ac.uk/jobs

Roger

Accommodation needed

Ivan Jezkova will be in Sheffield from 30. 10. to 16. 11. 2018 to visit the Butlin/Beckerman rotifer group. If you could help her with a room, please email her on ivana.jezkova@uv.es

Thanks

Roger

Postdoc and technican in Sweden

The AVIAN Behavioural Genomics and Physiology Group (Wright Lab) at Linköping University, Sweden, is looking for two new recruitments – a motivated technician and post-doc as part of a newly acquired ERC consolidator grant. The project is aimed at studying the genomics of feralisation, using Hawaiian and Bermudan chickens as a model.

In the case of the technician the individual should have extensive experience of working with chickens, collecting physiological and behavioural samples and phenotypes, and dissection. In addition, the post will involve multiple field seasons in Hawaii and Bermuda, so field experience is also valuable. Laboratory skills, including DNA and RNA extraction, PCR, qPCR and the like are also required.

In the case of the post doc we are looking for a candidate with a strong background in quantitative genetics and bioinformatics. The project will involve a large amount of WGS data (including RNAseq and methseq data). The project will require selective sweep mapping, population genomics analysis of admixture as well as GWAS analysis (expression and standard).

The project itself has recently been funded by an ERC consolidator grant and is aiming to use a series of different populations of feralised chickens (domestic birds that have escaped and are now living wild throughout the Hawaiian Island chain) to map the genes and polymorphisms underlying their rapid responses to newly imposed selective forces.

Candidates are requested to apply formally as per the official announcement at the following link for the technician post:

https://liu.se/en/work-at-liu/vacancies?rmpage=job&rmjob=8123&rmlang=UK

And the following link for the post-doc position:

https://liu.se/en/work-at-liu/vacancies?rmpage=job&rmjob=8069&rmlang=UK

The application must be received by the 10th April for the technician position and the 13th April for the post-doc position. Pre-selected candidates will be expected to pass a skype or on-site interview. Successful candidates will be offered standard contract for two years, with the option to extend this to a maximum of five years.

The Wright lab is part of the AVIAN behavioural genomics and physiology group, which comprises of a variety of researchers using the chicken as a model. As such there is on-going research in behaviour, physiology, evolution, genetics and genomics amongst others. Linköping University is a large campus-based University with over 30000 staff and students. Linköping itself is the fifth largest city in Sweden, with an international airport and good rail and bus links throughout the country. For further enquiries about the positions please contact Dominic Wright (domwright@gmail.com or domwr@ifm.liu.se) for further information.

Accommodation needed

A visitor to my group (Antonia, a.salcescastellano@ipna.csic.es) is looking for accommodation from 10 June to 10 August. She just heard that her funding application failed so she need something inexpensive…

If you might be able to help with a spare room for all/part of the time, please email Antonia.

Thanks

Roger